Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 B3GAT3P1-201ENST00000471720 806 ntBASIC20.59■□□□□ 0.89
RNF135Q8IUD6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 AC026271.3-201ENST00000571884 352 ntBASIC20.59■□□□□ 0.89
RNF135Q8IUD6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 AL138966.2-201ENST00000621997 464 ntBASIC20.59■□□□□ 0.89
RNF135Q8IUD6 AL121956.5-201ENST00000625261 221 ntBASIC20.59■□□□□ 0.89
RNF135Q8IUD6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 AC092667.1-201ENST00000434301 2586 ntBASIC20.59■□□□□ 0.89
RNF135Q8IUD6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 IER3-202ENST00000376377 1350 ntBASIC20.59■□□□□ 0.89
RNF135Q8IUD6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF135Q8IUD6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 CLEC4GP1-201ENST00000596555 870 ntBASIC20.58■□□□□ 0.89
RNF135Q8IUD6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.58■□□□□ 0.89
RNF135Q8IUD6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF135Q8IUD6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF135Q8IUD6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF135Q8IUD6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF135Q8IUD6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 LINC01521-201ENST00000504184 1943 ntBASIC20.57■□□□□ 0.88
RNF135Q8IUD6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 HCG4P8-203ENST00000443049 980 ntBASIC20.57■□□□□ 0.88
RNF135Q8IUD6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
RNF135Q8IUD6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 AC011506.1-201ENST00000474329 610 ntBASIC20.56■□□□□ 0.88
RNF135Q8IUD6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF135Q8IUD6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF135Q8IUD6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF135Q8IUD6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF135Q8IUD6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF135Q8IUD6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF135Q8IUD6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF135Q8IUD6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF135Q8IUD6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms