Protein–RNA interactions for Protein: Q6UXM1

LRIG3, Leucine-rich repeats and immunoglobulin-like domains protein 3, humanhuman

Predictions only

Length 1,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3Q6UXM1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.79■□□□□ 0.76
LRIG3Q6UXM1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 MIR6084-201ENST00000622012 110 ntBASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRIG3Q6UXM1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 AC020763.4-201ENST00000623414 4170 ntBASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRIG3Q6UXM1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.77■□□□□ 0.75
LRIG3Q6UXM1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRIG3Q6UXM1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.77■□□□□ 0.75
LRIG3Q6UXM1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRIG3Q6UXM1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRIG3Q6UXM1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.77■□□□□ 0.75
LRIG3Q6UXM1 MKRN4P-201ENST00000444706 1521 ntBASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.76■□□□□ 0.75
LRIG3Q6UXM1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRIG3Q6UXM1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRIG3Q6UXM1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms