Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 C1QL1P1-201ENST00000568105 661 ntBASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 AP006294.2-201ENST00000641667 209 ntBASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 AL135905.2-201ENST00000584934 1404 ntBASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.33■□□□□ 0.68
LDLRAP1Q5SW96 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 AL353807.1-201ENST00000427475 662 ntBASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDLRAP1Q5SW96 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 HTR7P1-201ENST00000538670 1336 ntBASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDLRAP1Q5SW96 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LDLRAP1Q5SW96 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms