Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 TSPY9P-201ENST00000440215 945 ntBASIC9.75□□□□□ -0.85
LINC01554Q52M75 TSPY11P-201ENST00000442607 1045 ntBASIC9.75□□□□□ -0.85
LINC01554Q52M75 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LINC01554Q52M75 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC9.75□□□□□ -0.85
LINC01554Q52M75 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 BID-204ENST00000399767 2129 ntTSL 2 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 MYB-242ENST00000618728 3545 ntTSL 5 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 AC244015.2-201ENST00000616358 1861 ntBASIC9.74□□□□□ -0.85
LINC01554Q52M75 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
LINC01554Q52M75 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LINC01554Q52M75 Z98882.1-201ENST00000622160 2253 ntBASIC9.73□□□□□ -0.85
LINC01554Q52M75 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01554Q52M75 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01554Q52M75 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC9.73□□□□□ -0.85
LINC01554Q52M75 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC9.73□□□□□ -0.85
LINC01554Q52M75 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01554Q52M75 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01554Q52M75 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC9.73□□□□□ -0.85
LINC01554Q52M75 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
LINC01554Q52M75 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01554Q52M75 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC9.73□□□□□ -0.85
LINC01554Q52M75 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01554Q52M75 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
LINC01554Q52M75 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC9.73□□□□□ -0.85
LINC01554Q52M75 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC9.73□□□□□ -0.85
LINC01554Q52M75 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC9.73□□□□□ -0.85
LINC01554Q52M75 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms