Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN2P57739 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN2P57739 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN2P57739 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN2P57739 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN2P57739 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN2P57739 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN2P57739 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN2P57739 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CLDN2P57739 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLDN2P57739 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN2P57739 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLDN2P57739 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLDN2P57739 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN2P57739 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN2P57739 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN2P57739 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN2P57739 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN2P57739 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN2P57739 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN2P57739 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN2P57739 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.19■□□□□ 0.66
CLDN2P57739 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN2P57739 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN2P57739 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN2P57739 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN2P57739 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN2P57739 KRT18P35-201ENST00000510488 1269 ntBASIC19.19■□□□□ 0.66
CLDN2P57739 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.19■□□□□ 0.66
CLDN2P57739 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN2P57739 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CLDN2P57739 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN2P57739 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN2P57739 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN2P57739 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN2P57739 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN2P57739 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN2P57739 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN2P57739 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN2P57739 AC112907.3-201ENST00000577781 2400 ntBASIC19.19■□□□□ 0.66
CLDN2P57739 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN2P57739 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CLDN2P57739 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN2P57739 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
CLDN2P57739 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN2P57739 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CLDN2P57739 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN2P57739 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN2P57739 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN2P57739 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN2P57739 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLDN2P57739 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN2P57739 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN2P57739 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.18■□□□□ 0.66
CLDN2P57739 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLDN2P57739 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CLDN2P57739 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN2P57739 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN2P57739 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CLDN2P57739 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN2P57739 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN2P57739 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLDN2P57739 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN2P57739 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN2P57739 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN2P57739 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN2P57739 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN2P57739 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN2P57739 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN2P57739 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.17■□□□□ 0.66
CLDN2P57739 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN2P57739 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN2P57739 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN2P57739 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN2P57739 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CLDN2P57739 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN2P57739 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLDN2P57739 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN2P57739 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CLDN2P57739 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN2P57739 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN2P57739 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN2P57739 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN2P57739 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN2P57739 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN2P57739 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN2P57739 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN2P57739 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLDN2P57739 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN2P57739 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN2P57739 LIN28AP1-201ENST00000429574 405 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms