Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
CDR1P51861 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CDR1P51861 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDR1P51861 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
CDR1P51861 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.2■□□□□ 0.99
CDR1P51861 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.2■□□□□ 0.99
CDR1P51861 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.2■□□□□ 0.98
CDR1P51861 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDR1P51861 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CDR1P51861 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.2■□□□□ 0.98
CDR1P51861 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDR1P51861 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDR1P51861 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDR1P51861 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDR1P51861 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.2■□□□□ 0.98
CDR1P51861 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDR1P51861 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.2■□□□□ 0.98
CDR1P51861 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDR1P51861 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.2■□□□□ 0.98
CDR1P51861 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CDR1P51861 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDR1P51861 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CDR1P51861 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDR1P51861 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDR1P51861 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDR1P51861 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDR1P51861 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDR1P51861 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDR1P51861 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDR1P51861 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDR1P51861 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDR1P51861 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDR1P51861 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CDR1P51861 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDR1P51861 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.19■□□□□ 0.98
CDR1P51861 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.19■□□□□ 0.98
CDR1P51861 AC023632.3-201ENST00000521633 145 ntBASIC21.19■□□□□ 0.98
CDR1P51861 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.19■□□□□ 0.98
CDR1P51861 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.19■□□□□ 0.98
CDR1P51861 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDR1P51861 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.19■□□□□ 0.98
CDR1P51861 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.19■□□□□ 0.98
CDR1P51861 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDR1P51861 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDR1P51861 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
CDR1P51861 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.19■□□□□ 0.98
CDR1P51861 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDR1P51861 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CDR1P51861 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.19■□□□□ 0.98
CDR1P51861 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.19■□□□□ 0.98
CDR1P51861 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDR1P51861 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDR1P51861 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CDR1P51861 AL512408.1-201ENST00000569378 2000 ntBASIC21.18■□□□□ 0.98
CDR1P51861 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.18■□□□□ 0.98
CDR1P51861 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDR1P51861 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CDR1P51861 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
CDR1P51861 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.18■□□□□ 0.98
CDR1P51861 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.18■□□□□ 0.98
CDR1P51861 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.18■□□□□ 0.98
CDR1P51861 KRT8P17-201ENST00000453110 1448 ntBASIC21.18■□□□□ 0.98
CDR1P51861 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.18■□□□□ 0.98
CDR1P51861 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDR1P51861 AC020907.5-201ENST00000624372 1936 ntBASIC21.17■□□□□ 0.98
CDR1P51861 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDR1P51861 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDR1P51861 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDR1P51861 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CDR1P51861 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CDR1P51861 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDR1P51861 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDR1P51861 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDR1P51861 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDR1P51861 SNORA78-201ENST00000459373 127 ntBASIC21.17■□□□□ 0.98
CDR1P51861 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.17■□□□□ 0.98
CDR1P51861 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CDR1P51861 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.17■□□□□ 0.98
CDR1P51861 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CDR1P51861 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDR1P51861 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms