Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP8P40818 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.11■□□□□ 0.97
USP8P40818 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP8P40818 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.11■□□□□ 0.97
USP8P40818 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.11■□□□□ 0.97
USP8P40818 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.11■□□□□ 0.97
USP8P40818 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.11■□□□□ 0.97
USP8P40818 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.11■□□□□ 0.97
USP8P40818 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.11■□□□□ 0.97
USP8P40818 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.11■□□□□ 0.97
USP8P40818 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP8P40818 SOX15-203ENST00000570788 1093 ntBASIC21.11■□□□□ 0.97
USP8P40818 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP8P40818 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
USP8P40818 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.11■□□□□ 0.97
USP8P40818 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP8P40818 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.11■□□□□ 0.97
USP8P40818 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
USP8P40818 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP8P40818 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.11■□□□□ 0.97
USP8P40818 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP8P40818 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
USP8P40818 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
USP8P40818 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
USP8P40818 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
USP8P40818 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP8P40818 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.1■□□□□ 0.97
USP8P40818 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
USP8P40818 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP8P40818 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
USP8P40818 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.1■□□□□ 0.97
USP8P40818 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.1■□□□□ 0.97
USP8P40818 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.1■□□□□ 0.97
USP8P40818 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.1■□□□□ 0.97
USP8P40818 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.1■□□□□ 0.97
USP8P40818 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
USP8P40818 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP8P40818 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP8P40818 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP8P40818 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP8P40818 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.1■□□□□ 0.97
USP8P40818 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.1■□□□□ 0.97
USP8P40818 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP8P40818 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
USP8P40818 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP8P40818 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.09■□□□□ 0.97
USP8P40818 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP8P40818 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP8P40818 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP8P40818 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.09■□□□□ 0.97
USP8P40818 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP8P40818 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.09■□□□□ 0.97
USP8P40818 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP8P40818 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP8P40818 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.09■□□□□ 0.97
USP8P40818 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
USP8P40818 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP8P40818 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.09■□□□□ 0.97
USP8P40818 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
USP8P40818 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.09■□□□□ 0.97
USP8P40818 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.09■□□□□ 0.97
USP8P40818 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.09■□□□□ 0.97
USP8P40818 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.09■□□□□ 0.97
USP8P40818 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.09■□□□□ 0.97
USP8P40818 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP8P40818 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP8P40818 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP8P40818 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP8P40818 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.09■□□□□ 0.97
USP8P40818 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP8P40818 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP8P40818 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
USP8P40818 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP8P40818 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP8P40818 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP8P40818 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.08■□□□□ 0.97
USP8P40818 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP8P40818 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.08■□□□□ 0.97
USP8P40818 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP8P40818 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP8P40818 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP8P40818 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP8P40818 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.08■□□□□ 0.97
USP8P40818 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.08■□□□□ 0.97
USP8P40818 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP8P40818 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.08■□□□□ 0.97
USP8P40818 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.08■□□□□ 0.97
USP8P40818 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP8P40818 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
USP8P40818 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP8P40818 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP8P40818 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP8P40818 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.08■□□□□ 0.96
USP8P40818 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
USP8P40818 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.08■□□□□ 0.96
USP8P40818 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP8P40818 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP8P40818 TFP1-202ENST00000475455 1573 ntBASIC21.07■□□□□ 0.96
USP8P40818 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms