Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLUP10909 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLUP10909 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLUP10909 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLUP10909 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.51■□□□□ 0.39
CLUP10909 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLUP10909 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLUP10909 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLUP10909 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.5■□□□□ 0.39
CLUP10909 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLUP10909 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.5■□□□□ 0.39
CLUP10909 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.5■□□□□ 0.39
CLUP10909 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLUP10909 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
CLUP10909 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.5■□□□□ 0.39
CLUP10909 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CLUP10909 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 GPX1P1-201ENST00000388829 606 ntBASIC17.5■□□□□ 0.39
CLUP10909 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.5■□□□□ 0.39
CLUP10909 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 AC022517.1-201ENST00000592429 346 ntBASIC17.5■□□□□ 0.39
CLUP10909 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.5■□□□□ 0.39
CLUP10909 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.5■□□□□ 0.39
CLUP10909 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.5■□□□□ 0.39
CLUP10909 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLUP10909 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CLUP10909 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CLUP10909 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.5■□□□□ 0.39
CLUP10909 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLUP10909 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CLUP10909 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.49■□□□□ 0.39
CLUP10909 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CLUP10909 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.49■□□□□ 0.39
CLUP10909 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.49■□□□□ 0.39
CLUP10909 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CLUP10909 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CLUP10909 LSM12P1-201ENST00000411836 588 ntBASIC17.49■□□□□ 0.39
CLUP10909 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.49■□□□□ 0.39
CLUP10909 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.49■□□□□ 0.39
CLUP10909 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLUP10909 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.48■□□□□ 0.39
CLUP10909 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLUP10909 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLUP10909 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.48■□□□□ 0.39
CLUP10909 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLUP10909 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CLUP10909 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLUP10909 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CLUP10909 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.48■□□□□ 0.39
CLUP10909 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.48■□□□□ 0.39
CLUP10909 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLUP10909 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLUP10909 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLUP10909 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.48■□□□□ 0.39
CLUP10909 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.48■□□□□ 0.39
CLUP10909 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLUP10909 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.48■□□□□ 0.39
CLUP10909 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLUP10909 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLUP10909 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLUP10909 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLUP10909 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLUP10909 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLUP10909 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLUP10909 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms