Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT6AP02538 AC124283.5-201ENST00000624661 1809 ntBASIC18.81■□□□□ 0.6
KRT6AP02538 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6AP02538 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6AP02538 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6AP02538 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KRT6AP02538 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KRT6AP02538 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KRT6AP02538 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KRT6AP02538 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6AP02538 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT6AP02538 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT6AP02538 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
KRT6AP02538 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6AP02538 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6AP02538 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6AP02538 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6AP02538 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KRT6AP02538 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6AP02538 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6AP02538 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT6AP02538 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
KRT6AP02538 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
KRT6AP02538 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6AP02538 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT6AP02538 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6AP02538 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT6AP02538 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6AP02538 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6AP02538 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6AP02538 PNMA6B-201ENST00000538162 1200 ntBASIC18.79■□□□□ 0.6
KRT6AP02538 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.79■□□□□ 0.6
KRT6AP02538 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.79■□□□□ 0.6
KRT6AP02538 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6AP02538 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6AP02538 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6AP02538 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6AP02538 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT6AP02538 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT6AP02538 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
KRT6AP02538 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6AP02538 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6AP02538 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT6AP02538 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT6AP02538 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
KRT6AP02538 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6AP02538 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.78■□□□□ 0.6
KRT6AP02538 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6AP02538 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6AP02538 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6AP02538 AL020996.1-203ENST00000536896 2307 ntBASIC18.78■□□□□ 0.6
KRT6AP02538 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
KRT6AP02538 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
KRT6AP02538 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
KRT6AP02538 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
KRT6AP02538 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.78■□□□□ 0.6
KRT6AP02538 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.78■□□□□ 0.6
KRT6AP02538 AL138781.1-201ENST00000566567 1274 ntBASIC18.78■□□□□ 0.6
KRT6AP02538 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6AP02538 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.78■□□□□ 0.6
KRT6AP02538 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.78■□□□□ 0.6
KRT6AP02538 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.78■□□□□ 0.6
KRT6AP02538 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6AP02538 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6AP02538 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6AP02538 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6AP02538 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6AP02538 AP006587.1-201ENST00000534129 1502 ntBASIC18.78■□□□□ 0.6
KRT6AP02538 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6AP02538 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6AP02538 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6AP02538 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6AP02538 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6AP02538 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT6AP02538 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6AP02538 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6AP02538 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6AP02538 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6AP02538 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6AP02538 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6AP02538 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT6AP02538 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT6AP02538 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
KRT6AP02538 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6AP02538 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6AP02538 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT6AP02538 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT6AP02538 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.77■□□□□ 0.6
KRT6AP02538 LINC01465-201ENST00000408887 1940 ntBASIC18.77■□□□□ 0.6
KRT6AP02538 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6AP02538 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6AP02538 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.77■□□□□ 0.6
KRT6AP02538 YBX1P10-201ENST00000444752 975 ntBASIC18.77■□□□□ 0.6
KRT6AP02538 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT6AP02538 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.77■□□□□ 0.6
KRT6AP02538 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT6AP02538 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT6AP02538 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT6AP02538 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
KRT6AP02538 AL109923.1-201ENST00000618799 583 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms