Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.03■□□□□ 0.32
KDM4BO94953 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
KDM4BO94953 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.03■□□□□ 0.32
KDM4BO94953 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.03■□□□□ 0.32
KDM4BO94953 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDM4BO94953 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KDM4BO94953 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KDM4BO94953 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDM4BO94953 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDM4BO94953 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
KDM4BO94953 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KDM4BO94953 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
KDM4BO94953 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDM4BO94953 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDM4BO94953 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDM4BO94953 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDM4BO94953 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.02■□□□□ 0.32
KDM4BO94953 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KDM4BO94953 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDM4BO94953 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDM4BO94953 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.02■□□□□ 0.32
KDM4BO94953 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDM4BO94953 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
KDM4BO94953 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDM4BO94953 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.02■□□□□ 0.32
KDM4BO94953 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.02■□□□□ 0.32
KDM4BO94953 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDM4BO94953 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.02■□□□□ 0.32
KDM4BO94953 BID-214ENST00000617586 542 ntTSL 5 BASIC17.02■□□□□ 0.32
KDM4BO94953 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDM4BO94953 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KDM4BO94953 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KDM4BO94953 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
KDM4BO94953 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
KDM4BO94953 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KDM4BO94953 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KDM4BO94953 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KDM4BO94953 AC009237.14-201ENST00000609975 1594 ntBASIC17.02■□□□□ 0.31
KDM4BO94953 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
KDM4BO94953 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.02■□□□□ 0.31
KDM4BO94953 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.02■□□□□ 0.31
KDM4BO94953 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
KDM4BO94953 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.01■□□□□ 0.31
KDM4BO94953 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.01■□□□□ 0.31
KDM4BO94953 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.01■□□□□ 0.31
KDM4BO94953 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.01■□□□□ 0.31
KDM4BO94953 CYP2T1P-201ENST00000432607 1285 ntBASIC17.01■□□□□ 0.31
KDM4BO94953 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.01■□□□□ 0.31
KDM4BO94953 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.01■□□□□ 0.31
KDM4BO94953 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 AC069236.1-201ENST00000604339 616 ntBASIC17.01■□□□□ 0.31
KDM4BO94953 AC105020.6-201ENST00000621523 1217 ntBASIC17.01■□□□□ 0.31
KDM4BO94953 AC231657.2-201ENST00000624556 255 ntBASIC17.01■□□□□ 0.31
KDM4BO94953 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.01■□□□□ 0.31
KDM4BO94953 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.01■□□□□ 0.31
KDM4BO94953 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
KDM4BO94953 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
KDM4BO94953 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
KDM4BO94953 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KDM4BO94953 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.01■□□□□ 0.31
KDM4BO94953 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
KDM4BO94953 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
KDM4BO94953 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
KDM4BO94953 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
KDM4BO94953 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
KDM4BO94953 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17■□□□□ 0.31
KDM4BO94953 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
KDM4BO94953 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KDM4BO94953 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17■□□□□ 0.31
KDM4BO94953 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17■□□□□ 0.31
KDM4BO94953 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17■□□□□ 0.31
KDM4BO94953 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17■□□□□ 0.31
KDM4BO94953 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KDM4BO94953 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KDM4BO94953 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KDM4BO94953 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KDM4BO94953 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17■□□□□ 0.31
KDM4BO94953 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17■□□□□ 0.31
KDM4BO94953 KRT16P6-202ENST00000425692 1426 ntBASIC17■□□□□ 0.31
KDM4BO94953 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17■□□□□ 0.31
KDM4BO94953 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
KDM4BO94953 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
KDM4BO94953 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms