Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL160286.2-201ENST00000567150 934 ntBASIC19.67■□□□□ 0.74
SMAD6O43541 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.67■□□□□ 0.74
SMAD6O43541 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMAD6O43541 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMAD6O43541 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SMAD6O43541 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMAD6O43541 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.67■□□□□ 0.74
SMAD6O43541 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMAD6O43541 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.67■□□□□ 0.74
SMAD6O43541 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.66■□□□□ 0.74
SMAD6O43541 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SMAD6O43541 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 UNC93B2-201ENST00000285383 730 ntBASIC19.66■□□□□ 0.74
SMAD6O43541 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.66■□□□□ 0.74
SMAD6O43541 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.66■□□□□ 0.74
SMAD6O43541 AC211429.1-201ENST00000415277 523 ntBASIC19.66■□□□□ 0.74
SMAD6O43541 AC087499.1-201ENST00000418141 1075 ntBASIC19.66■□□□□ 0.74
SMAD6O43541 AL390955.1-201ENST00000428694 934 ntBASIC19.66■□□□□ 0.74
SMAD6O43541 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.66■□□□□ 0.74
SMAD6O43541 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.66■□□□□ 0.74
SMAD6O43541 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.66■□□□□ 0.74
SMAD6O43541 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SMAD6O43541 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SMAD6O43541 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.66■□□□□ 0.74
SMAD6O43541 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 AC130371.2-201ENST00000619443 611 ntBASIC19.66■□□□□ 0.74
SMAD6O43541 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.66■□□□□ 0.74
SMAD6O43541 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.66■□□□□ 0.74
SMAD6O43541 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD6O43541 KRT8P9-201ENST00000558927 1449 ntBASIC19.66■□□□□ 0.74
SMAD6O43541 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.66■□□□□ 0.74
SMAD6O43541 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.66■□□□□ 0.74
SMAD6O43541 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SMAD6O43541 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMAD6O43541 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SMAD6O43541 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.65■□□□□ 0.74
SMAD6O43541 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMAD6O43541 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMAD6O43541 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMAD6O43541 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMAD6O43541 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.65■□□□□ 0.74
SMAD6O43541 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMAD6O43541 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMAD6O43541 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.65■□□□□ 0.74
SMAD6O43541 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
SMAD6O43541 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.65■□□□□ 0.74
SMAD6O43541 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.65■□□□□ 0.74
SMAD6O43541 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMAD6O43541 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SMAD6O43541 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMAD6O43541 TREX1-205ENST00000625293 1783 ntBASIC19.65■□□□□ 0.74
SMAD6O43541 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.64■□□□□ 0.74
SMAD6O43541 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.64■□□□□ 0.74
SMAD6O43541 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD6O43541 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD6O43541 MMP23A-201ENST00000234610 1017 ntBASIC19.64■□□□□ 0.73
SMAD6O43541 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD6O43541 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD6O43541 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD6O43541 MIR1238-201ENST00000408483 83 ntBASIC19.64■□□□□ 0.73
SMAD6O43541 ECEL1P3-201ENST00000427961 737 ntBASIC19.64■□□□□ 0.73
SMAD6O43541 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD6O43541 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SMAD6O43541 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.64■□□□□ 0.73
SMAD6O43541 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD6O43541 AC011298.2-201ENST00000617989 482 ntBASIC19.64■□□□□ 0.73
SMAD6O43541 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SMAD6O43541 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD6O43541 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD6O43541 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD6O43541 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.64■□□□□ 0.73
SMAD6O43541 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD6O43541 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
SMAD6O43541 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SMAD6O43541 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD6O43541 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD6O43541 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD6O43541 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.63■□□□□ 0.73
SMAD6O43541 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
SMAD6O43541 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD6O43541 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.63■□□□□ 0.73
SMAD6O43541 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SMAD6O43541 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SMAD6O43541 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD6O43541 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD6O43541 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD6O43541 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms