Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.43■□□□□ 0.54
UPK1AO00322 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.43■□□□□ 0.54
UPK1AO00322 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.43■□□□□ 0.54
UPK1AO00322 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.43■□□□□ 0.54
UPK1AO00322 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.43■□□□□ 0.54
UPK1AO00322 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1AO00322 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.43■□□□□ 0.54
UPK1AO00322 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1AO00322 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1AO00322 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.43■□□□□ 0.54
UPK1AO00322 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1AO00322 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UPK1AO00322 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1AO00322 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1AO00322 AC007613.1-201ENST00000572811 2597 ntBASIC18.42■□□□□ 0.54
UPK1AO00322 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.42■□□□□ 0.54
UPK1AO00322 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
UPK1AO00322 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.42■□□□□ 0.54
UPK1AO00322 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1AO00322 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.42■□□□□ 0.54
UPK1AO00322 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.42■□□□□ 0.54
UPK1AO00322 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1AO00322 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
UPK1AO00322 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.42■□□□□ 0.54
UPK1AO00322 RPS2P52-201ENST00000469610 820 ntBASIC18.42■□□□□ 0.54
UPK1AO00322 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.42■□□□□ 0.54
UPK1AO00322 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1AO00322 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.42■□□□□ 0.54
UPK1AO00322 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1AO00322 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.42■□□□□ 0.54
UPK1AO00322 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1AO00322 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1AO00322 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK1AO00322 TFP1-202ENST00000475455 1573 ntBASIC18.42■□□□□ 0.54
UPK1AO00322 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
UPK1AO00322 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.41■□□□□ 0.54
UPK1AO00322 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1AO00322 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1AO00322 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
UPK1AO00322 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1AO00322 AL049812.1-201ENST00000432563 2267 ntBASIC18.41■□□□□ 0.54
UPK1AO00322 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1AO00322 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1AO00322 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
UPK1AO00322 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1AO00322 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1AO00322 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
UPK1AO00322 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
UPK1AO00322 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1AO00322 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1AO00322 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.41■□□□□ 0.54
UPK1AO00322 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
UPK1AO00322 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1AO00322 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.41■□□□□ 0.54
UPK1AO00322 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK1AO00322 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
UPK1AO00322 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.4■□□□□ 0.54
UPK1AO00322 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.4■□□□□ 0.54
UPK1AO00322 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1AO00322 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1AO00322 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1AO00322 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1AO00322 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
UPK1AO00322 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1AO00322 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1AO00322 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1AO00322 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.4■□□□□ 0.54
UPK1AO00322 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.4■□□□□ 0.54
UPK1AO00322 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.4■□□□□ 0.54
UPK1AO00322 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1AO00322 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
UPK1AO00322 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.4■□□□□ 0.54
UPK1AO00322 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.4■□□□□ 0.54
UPK1AO00322 SOX15-203ENST00000570788 1093 ntBASIC18.4■□□□□ 0.54
UPK1AO00322 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.4■□□□□ 0.54
UPK1AO00322 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.4■□□□□ 0.54
UPK1AO00322 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
UPK1AO00322 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.4■□□□□ 0.54
UPK1AO00322 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
UPK1AO00322 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1AO00322 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.4■□□□□ 0.54
UPK1AO00322 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
UPK1AO00322 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1AO00322 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1AO00322 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
UPK1AO00322 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
UPK1AO00322 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1AO00322 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UPK1AO00322 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.39■□□□□ 0.54
UPK1AO00322 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.39■□□□□ 0.54
UPK1AO00322 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
UPK1AO00322 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPK1AO00322 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.39■□□□□ 0.53
UPK1AO00322 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
UPK1AO00322 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPK1AO00322 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPK1AO00322 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPK1AO00322 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
UPK1AO00322 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPK1AO00322 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms