Protein–RNA interactions for Protein: A0A1B0GTU2

CTXND1, Cortexin domain-containing 1, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTXND1A0A1B0GTU2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CTXND1A0A1B0GTU2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTXND1A0A1B0GTU2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.29■□□□□ 0.04
CTXND1A0A1B0GTU2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTXND1A0A1B0GTU2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTXND1A0A1B0GTU2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CTXND1A0A1B0GTU2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.29■□□□□ 0.04
CTXND1A0A1B0GTU2 TEX21P-204ENST00000641479 1693 ntBASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 KRT8P20-201ENST00000423953 1409 ntBASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 AC024257.2-201ENST00000549699 147 ntBASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 CCDC92B-201ENST00000575506 885 ntBASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 AC068880.1-201ENST00000507289 2297 ntBASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTXND1A0A1B0GTU2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.27■□□□□ 0.04
CTXND1A0A1B0GTU2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.27■□□□□ 0.03
CTXND1A0A1B0GTU2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTXND1A0A1B0GTU2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CTXND1A0A1B0GTU2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.27■□□□□ 0.03
CTXND1A0A1B0GTU2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTXND1A0A1B0GTU2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.27■□□□□ 0.03
CTXND1A0A1B0GTU2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.27■□□□□ 0.03
CTXND1A0A1B0GTU2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTXND1A0A1B0GTU2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CTXND1A0A1B0GTU2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTXND1A0A1B0GTU2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.27■□□□□ 0.03
CTXND1A0A1B0GTU2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.27■□□□□ 0.03
CTXND1A0A1B0GTU2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTXND1A0A1B0GTU2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTXND1A0A1B0GTU2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.26■□□□□ 0.03
CTXND1A0A1B0GTU2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTXND1A0A1B0GTU2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.26■□□□□ 0.03
CTXND1A0A1B0GTU2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTXND1A0A1B0GTU2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTXND1A0A1B0GTU2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTXND1A0A1B0GTU2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTXND1A0A1B0GTU2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.26■□□□□ 0.03
CTXND1A0A1B0GTU2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.26■□□□□ 0.03
CTXND1A0A1B0GTU2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTXND1A0A1B0GTU2 PHGDH-210ENST00000641115 1638 ntBASIC15.26■□□□□ 0.03
CTXND1A0A1B0GTU2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTXND1A0A1B0GTU2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTXND1A0A1B0GTU2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms