Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 AC004951.3-201ENST00000418645 1148 ntBASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 AC097488.1-201ENST00000507834 756 ntBASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 AP005242.2-201ENST00000580065 1175 ntBASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 HLA-A-209ENST00000638375 975 ntBASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 HCG11-201ENST00000411553 5696 ntBASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV10A0A0B4J240 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 CRYGFP-201ENST00000418459 633 ntBASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 TMPOP1-202ENST00000424642 1267 ntBASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 SLC25A1P4-201ENST00000567977 778 ntBASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 AC011298.2-201ENST00000617989 482 ntBASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV10A0A0B4J240 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV10A0A0B4J240 KRT8P9-201ENST00000558927 1449 ntBASIC13.71□□□□□ -0.22
TRAV10A0A0B4J240 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
TRAV10A0A0B4J240 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV10A0A0B4J240 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV10A0A0B4J240 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
TRAV10A0A0B4J240 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV10A0A0B4J240 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 MESTP1-201ENST00000404287 994 ntBASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 AC011506.1-201ENST00000474329 610 ntBASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 AC128688.1-201ENST00000487626 519 ntBASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 AC010331.1-201ENST00000611423 582 ntBASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 RCC2P6-201ENST00000526625 1557 ntBASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV10A0A0B4J240 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms