Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 AC099778.1-201ENST00000568593 1911 ntBASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 INGX-201ENST00000359239 846 ntBASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 FAM87A-204ENST00000613235 858 ntBASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV19A0A0A6YYK7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 KRT18P35-201ENST00000510488 1269 ntBASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TRAV19A0A0A6YYK7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TRAV19A0A0A6YYK7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.08■□□□□ 0.81
TRAV19A0A0A6YYK7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV19A0A0A6YYK7 HMGA1P5-201ENST00000412453 271 ntBASIC20.08■□□□□ 0.81
TRAV19A0A0A6YYK7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.08■□□□□ 0.81
TRAV19A0A0A6YYK7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.08■□□□□ 0.81
TRAV19A0A0A6YYK7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.08■□□□□ 0.81
TRAV19A0A0A6YYK7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.08■□□□□ 0.81
TRAV19A0A0A6YYK7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
TRAV19A0A0A6YYK7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
TRAV19A0A0A6YYK7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.08■□□□□ 0.81
TRAV19A0A0A6YYK7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.08■□□□□ 0.81
TRAV19A0A0A6YYK7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TRAV19A0A0A6YYK7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.08■□□□□ 0.8
TRAV19A0A0A6YYK7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV19A0A0A6YYK7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TRAV19A0A0A6YYK7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TRAV19A0A0A6YYK7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.08■□□□□ 0.8
TRAV19A0A0A6YYK7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV19A0A0A6YYK7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV19A0A0A6YYK7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 KRT8P41-201ENST00000533985 1514 ntBASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV19A0A0A6YYK7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV19A0A0A6YYK7 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.06■□□□□ 0.8
TRAV19A0A0A6YYK7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV19A0A0A6YYK7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV19A0A0A6YYK7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAV19A0A0A6YYK7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV19A0A0A6YYK7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV19A0A0A6YYK7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV19A0A0A6YYK7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TRAV19A0A0A6YYK7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAV19A0A0A6YYK7 ARMC10P1-201ENST00000313754 855 ntBASIC20.06■□□□□ 0.8
TRAV19A0A0A6YYK7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
TRAV19A0A0A6YYK7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAV19A0A0A6YYK7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms