Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 AL354811.1-201ENST00000610286 706 ntBASIC18.39■□□□□ 0.53
AP4S1Q9Y587 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP4S1Q9Y587 BCL2-203ENST00000589955 5011 ntBASIC18.39■□□□□ 0.53
AP4S1Q9Y587 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 FZD10-202ENST00000539839 3282 ntBASIC18.38■□□□□ 0.53
AP4S1Q9Y587 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 Z98044.1-201ENST00000632503 1764 ntBASIC18.38■□□□□ 0.53
AP4S1Q9Y587 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 AP001160.3-201ENST00000601484 763 ntBASIC18.38■□□□□ 0.53
AP4S1Q9Y587 AL031963.3-201ENST00000606441 850 ntBASIC18.38■□□□□ 0.53
AP4S1Q9Y587 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP4S1Q9Y587 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 KRT18P20-201ENST00000548986 1279 ntBASIC18.37■□□□□ 0.53
AP4S1Q9Y587 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 TEX21P-204ENST00000641479 1693 ntBASIC18.37■□□□□ 0.53
AP4S1Q9Y587 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
AP4S1Q9Y587 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 KRT8P20-201ENST00000423953 1409 ntBASIC18.36■□□□□ 0.53
AP4S1Q9Y587 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.36■□□□□ 0.53
AP4S1Q9Y587 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms