Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 KRT87P-202ENST00000534226 1464 ntBASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 NOC2LP1-202ENST00000452600 2235 ntBASIC17.11■□□□□ 0.33
COMMD3Q9UBI1 AC068880.1-201ENST00000507289 2297 ntBASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 NOC2LP2-201ENST00000407594 1944 ntBASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.1■□□□□ 0.33
COMMD3Q9UBI1 BICD1-207ENST00000551848 1962 ntBASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 AC091799.1-201ENST00000422823 811 ntBASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 AC008764.7-201ENST00000593779 1081 ntBASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 KRT16P6-202ENST00000425692 1426 ntBASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 AL354751.1-201ENST00000412768 1863 ntBASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
COMMD3Q9UBI1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.08■□□□□ 0.33
COMMD3Q9UBI1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COMMD3Q9UBI1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.08■□□□□ 0.33
COMMD3Q9UBI1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.08■□□□□ 0.33
COMMD3Q9UBI1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.08■□□□□ 0.32
COMMD3Q9UBI1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms