Protein–RNA interactions for Protein: Q9NXL2

ARHGEF38, Rho guanine nucleotide exchange factor 38, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38Q9NXL2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 C1QL1P1-201ENST00000568105 661 ntBASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARHGEF38Q9NXL2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 AFG3L1P-217ENST00000557444 2447 ntBASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 RARRES2P10-201ENST00000564312 460 ntBASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ARHGEF38Q9NXL2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 HTR7P1-201ENST00000538670 1336 ntBASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ARHGEF38Q9NXL2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF38Q9NXL2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms