Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.8■□□□□ 0.28
SDHCQ99643 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.8■□□□□ 0.28
SDHCQ99643 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDHCQ99643 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDHCQ99643 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SDHCQ99643 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDHCQ99643 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.8■□□□□ 0.28
SDHCQ99643 AC080080.1-201ENST00000625121 2420 ntBASIC16.8■□□□□ 0.28
SDHCQ99643 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDHCQ99643 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SDHCQ99643 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SDHCQ99643 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SDHCQ99643 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDHCQ99643 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
SDHCQ99643 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDHCQ99643 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SDHCQ99643 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.8■□□□□ 0.28
SDHCQ99643 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SDHCQ99643 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.8■□□□□ 0.28
SDHCQ99643 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SDHCQ99643 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SDHCQ99643 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.79■□□□□ 0.28
SDHCQ99643 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.79■□□□□ 0.28
SDHCQ99643 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SDHCQ99643 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.79■□□□□ 0.28
SDHCQ99643 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.79■□□□□ 0.28
SDHCQ99643 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.79■□□□□ 0.28
SDHCQ99643 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.79■□□□□ 0.28
SDHCQ99643 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.79■□□□□ 0.28
SDHCQ99643 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 FAM21FP-204ENST00000608637 956 ntBASIC16.79■□□□□ 0.28
SDHCQ99643 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SDHCQ99643 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.79■□□□□ 0.28
SDHCQ99643 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.79■□□□□ 0.28
SDHCQ99643 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.79■□□□□ 0.28
SDHCQ99643 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.79■□□□□ 0.28
SDHCQ99643 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.79■□□□□ 0.28
SDHCQ99643 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.79■□□□□ 0.28
SDHCQ99643 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.79■□□□□ 0.28
SDHCQ99643 KRT8P17-201ENST00000453110 1448 ntBASIC16.79■□□□□ 0.28
SDHCQ99643 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SDHCQ99643 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
SDHCQ99643 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.78■□□□□ 0.28
SDHCQ99643 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SDHCQ99643 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SDHCQ99643 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SDHCQ99643 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.78■□□□□ 0.28
SDHCQ99643 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.78■□□□□ 0.28
SDHCQ99643 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.78■□□□□ 0.28
SDHCQ99643 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.78■□□□□ 0.28
SDHCQ99643 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.78■□□□□ 0.28
SDHCQ99643 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SDHCQ99643 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SDHCQ99643 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SDHCQ99643 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SDHCQ99643 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
SDHCQ99643 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.77■□□□□ 0.28
SDHCQ99643 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.77■□□□□ 0.28
SDHCQ99643 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SDHCQ99643 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms