Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CHMP6Q96FZ7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
CHMP6Q96FZ7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP6Q96FZ7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 AC027612.3-201ENST00000413684 1047 ntBASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 Z98044.1-201ENST00000632503 1764 ntBASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 LINC02228-203ENST00000641970 1355 ntBASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHMP6Q96FZ7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP6Q96FZ7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms