Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.78■□□□□ 0.92
SHC3Q92529 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHC3Q92529 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.78■□□□□ 0.92
SHC3Q92529 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHC3Q92529 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SHC3Q92529 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHC3Q92529 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHC3Q92529 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SHC3Q92529 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.77■□□□□ 0.92
SHC3Q92529 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.77■□□□□ 0.92
SHC3Q92529 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHC3Q92529 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SHC3Q92529 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHC3Q92529 AC018445.3-201ENST00000624177 1945 ntBASIC20.77■□□□□ 0.92
SHC3Q92529 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHC3Q92529 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHC3Q92529 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHC3Q92529 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHC3Q92529 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.77■□□□□ 0.92
SHC3Q92529 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.77■□□□□ 0.92
SHC3Q92529 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.77■□□□□ 0.92
SHC3Q92529 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SHC3Q92529 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHC3Q92529 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SHC3Q92529 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
SHC3Q92529 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.77■□□□□ 0.91
SHC3Q92529 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.91
SHC3Q92529 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SHC3Q92529 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.77■□□□□ 0.91
SHC3Q92529 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.77■□□□□ 0.91
SHC3Q92529 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
SHC3Q92529 SDHAP1-207ENST00000440850 2000 ntBASIC20.77■□□□□ 0.91
SHC3Q92529 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SHC3Q92529 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHC3Q92529 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHC3Q92529 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SHC3Q92529 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.76■□□□□ 0.91
SHC3Q92529 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SHC3Q92529 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SHC3Q92529 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHC3Q92529 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SHC3Q92529 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHC3Q92529 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHC3Q92529 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.76■□□□□ 0.91
SHC3Q92529 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.76■□□□□ 0.91
SHC3Q92529 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SHC3Q92529 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.76■□□□□ 0.91
SHC3Q92529 CD99P1-205ENST00000527459 561 ntBASIC20.76■□□□□ 0.91
SHC3Q92529 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SHC3Q92529 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.76■□□□□ 0.91
SHC3Q92529 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.76■□□□□ 0.91
SHC3Q92529 MIR4651-201ENST00000582622 73 ntBASIC20.76■□□□□ 0.91
SHC3Q92529 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SHC3Q92529 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SHC3Q92529 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SHC3Q92529 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SHC3Q92529 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SHC3Q92529 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHC3Q92529 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SHC3Q92529 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SHC3Q92529 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHC3Q92529 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHC3Q92529 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHC3Q92529 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHC3Q92529 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.75■□□□□ 0.91
SHC3Q92529 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHC3Q92529 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.75■□□□□ 0.91
SHC3Q92529 TEX21P-204ENST00000641479 1693 ntBASIC20.75■□□□□ 0.91
SHC3Q92529 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHC3Q92529 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHC3Q92529 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.75■□□□□ 0.91
SHC3Q92529 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.75■□□□□ 0.91
SHC3Q92529 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.75■□□□□ 0.91
SHC3Q92529 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.75■□□□□ 0.91
SHC3Q92529 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.75■□□□□ 0.91
SHC3Q92529 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
SHC3Q92529 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHC3Q92529 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.75■□□□□ 0.91
SHC3Q92529 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SHC3Q92529 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHC3Q92529 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.75■□□□□ 0.91
SHC3Q92529 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.75■□□□□ 0.91
SHC3Q92529 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHC3Q92529 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHC3Q92529 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.75■□□□□ 0.91
SHC3Q92529 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHC3Q92529 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHC3Q92529 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SHC3Q92529 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.74■□□□□ 0.91
SHC3Q92529 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SHC3Q92529 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHC3Q92529 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SHC3Q92529 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHC3Q92529 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SHC3Q92529 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SHC3Q92529 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.74■□□□□ 0.91
SHC3Q92529 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.74■□□□□ 0.91
SHC3Q92529 C1QL1P1-201ENST00000568105 661 ntBASIC20.74■□□□□ 0.91
SHC3Q92529 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.74■□□□□ 0.91
SHC3Q92529 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms