Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 AC128676.1-201ENST00000454392 318 ntBASIC20.89■□□□□ 0.93
LMO3Q8TAP4 AC133681.1-201ENST00000465482 601 ntBASIC20.89■□□□□ 0.93
LMO3Q8TAP4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 AC124016.1-201ENST00000609552 612 ntBASIC20.89■□□□□ 0.93
LMO3Q8TAP4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LMO3Q8TAP4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 C1QL1P1-201ENST00000568105 661 ntBASIC20.88■□□□□ 0.93
LMO3Q8TAP4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMO3Q8TAP4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 KRASP1-201ENST00000407852 552 ntBASIC20.87■□□□□ 0.93
LMO3Q8TAP4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 AC141586.3-201ENST00000562166 1838 ntBASIC20.87■□□□□ 0.93
LMO3Q8TAP4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 AP000974.1-201ENST00000623909 2387 ntBASIC20.87■□□□□ 0.93
LMO3Q8TAP4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LMO3Q8TAP4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 LINC01465-201ENST00000408887 1940 ntBASIC20.86■□□□□ 0.93
LMO3Q8TAP4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 HLA-A-209ENST00000638375 975 ntBASIC20.86■□□□□ 0.93
LMO3Q8TAP4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 AC087289.5-201ENST00000586076 3175 ntBASIC20.86■□□□□ 0.93
LMO3Q8TAP4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LMO3Q8TAP4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.85■□□□□ 0.93
LMO3Q8TAP4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms