Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 TNXA-203ENST00000507684 2038 ntBASIC18.54■□□□□ 0.56
VPS37AQ8NEZ2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS37AQ8NEZ2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS37AQ8NEZ2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS37AQ8NEZ2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VPS37AQ8NEZ2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VPS37AQ8NEZ2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 TFP1-202ENST00000475455 1573 ntBASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 CDCA4P2-201ENST00000441182 718 ntBASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 AC005829.2-201ENST00000571422 1056 ntBASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 LINC01465-201ENST00000408887 1940 ntBASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
VPS37AQ8NEZ2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
VPS37AQ8NEZ2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
VPS37AQ8NEZ2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VPS37AQ8NEZ2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.52■□□□□ 0.55
VPS37AQ8NEZ2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VPS37AQ8NEZ2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
VPS37AQ8NEZ2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37AQ8NEZ2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37AQ8NEZ2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37AQ8NEZ2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37AQ8NEZ2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.5■□□□□ 0.55
VPS37AQ8NEZ2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37AQ8NEZ2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37AQ8NEZ2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37AQ8NEZ2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.5■□□□□ 0.55
VPS37AQ8NEZ2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37AQ8NEZ2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VPS37AQ8NEZ2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
VPS37AQ8NEZ2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms