Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 KRT18P6-201ENST00000555540 1265 ntBASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 AC008403.3-201ENST00000598924 454 ntBASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TTC9CQ8N5M4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 AC093484.2-201ENST00000580996 2166 ntBASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 AP003097.1-201ENST00000530657 1135 ntBASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 PRKY-204ENST00000533551 1019 ntBASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 HCG11-201ENST00000411553 5696 ntBASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 AC116562.4-201ENST00000641316 2276 ntBASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TTC9CQ8N5M4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 KRT17P3-201ENST00000420566 1262 ntBASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 AC026366.1-201ENST00000488803 879 ntBASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TTC9CQ8N5M4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.35■□□□□ 0.05
TTC9CQ8N5M4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms