Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SCUBE3Q8IX30 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCUBE3Q8IX30 AL596275.1-201ENST00000423464 877 ntBASIC20.49■□□□□ 0.87
SCUBE3Q8IX30 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCUBE3Q8IX30 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCUBE3Q8IX30 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.49■□□□□ 0.87
SCUBE3Q8IX30 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCUBE3Q8IX30 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCUBE3Q8IX30 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.49■□□□□ 0.87
SCUBE3Q8IX30 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCUBE3Q8IX30 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 RPS2P4-201ENST00000476944 856 ntBASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCUBE3Q8IX30 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 HTR7P1-201ENST00000538670 1336 ntBASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCUBE3Q8IX30 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 C1QL1P1-201ENST00000568105 661 ntBASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SCUBE3Q8IX30 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms