Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 CYP2T1P-201ENST00000432607 1285 ntBASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 AL162430.1-201ENST00000480705 870 ntBASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 AC105020.6-201ENST00000621523 1217 ntBASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 AC026471.1-201ENST00000564629 3026 ntBASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
PTCHD4Q6ZW05 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 BID-214ENST00000617586 542 ntTSL 5 BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PTCHD4Q6ZW05 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 BCL2-203ENST00000589955 5011 ntBASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms