Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 AC026366.1-201ENST00000488803 879 ntBASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 RNA5SP413-201ENST00000516373 109 ntBASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 AL121906.2-201ENST00000621597 723 ntBASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 AC026471.1-201ENST00000564629 3026 ntBASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NHLRC1Q6VVB1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 AP003097.1-201ENST00000530657 1135 ntBASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NHLRC1Q6VVB1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
NHLRC1Q6VVB1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 AP000974.1-201ENST00000623909 2387 ntBASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 AC004408.2-201ENST00000623613 2777 ntBASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NHLRC1Q6VVB1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NHLRC1Q6VVB1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms