Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
VARS2Q5ST30 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.63■□□□□ 0.89
VARS2Q5ST30 ECEL1P2-202ENST00000465689 757 ntBASIC20.63■□□□□ 0.89
VARS2Q5ST30 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.63■□□□□ 0.89
VARS2Q5ST30 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.63■□□□□ 0.89
VARS2Q5ST30 LINC01006-201ENST00000333319 2292 ntBASIC20.63■□□□□ 0.89
VARS2Q5ST30 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VARS2Q5ST30 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
VARS2Q5ST30 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
VARS2Q5ST30 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.63■□□□□ 0.89
VARS2Q5ST30 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.63■□□□□ 0.89
VARS2Q5ST30 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VARS2Q5ST30 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VARS2Q5ST30 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VARS2Q5ST30 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.62■□□□□ 0.89
VARS2Q5ST30 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
VARS2Q5ST30 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.62■□□□□ 0.89
VARS2Q5ST30 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.62■□□□□ 0.89
VARS2Q5ST30 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.62■□□□□ 0.89
VARS2Q5ST30 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
VARS2Q5ST30 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VARS2Q5ST30 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VARS2Q5ST30 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VARS2Q5ST30 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
VARS2Q5ST30 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VARS2Q5ST30 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VARS2Q5ST30 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VARS2Q5ST30 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.61■□□□□ 0.89
VARS2Q5ST30 AL157384.1-201ENST00000445995 2473 ntBASIC20.61■□□□□ 0.89
VARS2Q5ST30 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
VARS2Q5ST30 INGX-201ENST00000359239 846 ntBASIC20.61■□□□□ 0.89
VARS2Q5ST30 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
VARS2Q5ST30 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
VARS2Q5ST30 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.61■□□□□ 0.89
VARS2Q5ST30 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.61■□□□□ 0.89
VARS2Q5ST30 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.61■□□□□ 0.89
VARS2Q5ST30 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.61■□□□□ 0.89
VARS2Q5ST30 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.61■□□□□ 0.89
VARS2Q5ST30 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
VARS2Q5ST30 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VARS2Q5ST30 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
VARS2Q5ST30 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VARS2Q5ST30 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARS2Q5ST30 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.6■□□□□ 0.89
VARS2Q5ST30 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARS2Q5ST30 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARS2Q5ST30 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARS2Q5ST30 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARS2Q5ST30 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.6■□□□□ 0.89
VARS2Q5ST30 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARS2Q5ST30 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARS2Q5ST30 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.6■□□□□ 0.89
VARS2Q5ST30 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARS2Q5ST30 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.6■□□□□ 0.89
VARS2Q5ST30 AC128688.1-201ENST00000487626 519 ntBASIC20.6■□□□□ 0.89
VARS2Q5ST30 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
VARS2Q5ST30 AC010203.1-204ENST00000548782 407 ntBASIC20.6■□□□□ 0.89
VARS2Q5ST30 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.6■□□□□ 0.89
VARS2Q5ST30 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VARS2Q5ST30 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARS2Q5ST30 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARS2Q5ST30 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.6■□□□□ 0.89
VARS2Q5ST30 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VARS2Q5ST30 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARS2Q5ST30 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VARS2Q5ST30 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VARS2Q5ST30 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
VARS2Q5ST30 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VARS2Q5ST30 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
VARS2Q5ST30 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VARS2Q5ST30 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VARS2Q5ST30 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VARS2Q5ST30 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VARS2Q5ST30 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VARS2Q5ST30 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VARS2Q5ST30 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VARS2Q5ST30 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VARS2Q5ST30 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.59■□□□□ 0.89
VARS2Q5ST30 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VARS2Q5ST30 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.59■□□□□ 0.89
VARS2Q5ST30 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.59■□□□□ 0.89
VARS2Q5ST30 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.59■□□□□ 0.89
VARS2Q5ST30 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.59■□□□□ 0.89
VARS2Q5ST30 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
VARS2Q5ST30 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.59■□□□□ 0.89
VARS2Q5ST30 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VARS2Q5ST30 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
VARS2Q5ST30 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VARS2Q5ST30 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VARS2Q5ST30 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.59■□□□□ 0.89
VARS2Q5ST30 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.59■□□□□ 0.89
VARS2Q5ST30 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
VARS2Q5ST30 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VARS2Q5ST30 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VARS2Q5ST30 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.58■□□□□ 0.89
VARS2Q5ST30 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
VARS2Q5ST30 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
VARS2Q5ST30 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
VARS2Q5ST30 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
VARS2Q5ST30 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms