Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PER3P56645 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
PER3P56645 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PER3P56645 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
PER3P56645 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PER3P56645 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 UNC93B2-201ENST00000285383 730 ntBASIC17.98■□□□□ 0.47
PER3P56645 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
PER3P56645 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PER3P56645 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.98■□□□□ 0.47
PER3P56645 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.98■□□□□ 0.47
PER3P56645 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.98■□□□□ 0.47
PER3P56645 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.98■□□□□ 0.47
PER3P56645 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 BX323043.1-201ENST00000641006 1765 ntBASIC17.98■□□□□ 0.47
PER3P56645 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.98■□□□□ 0.47
PER3P56645 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PER3P56645 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PER3P56645 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
PER3P56645 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PER3P56645 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PER3P56645 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PER3P56645 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.97■□□□□ 0.47
PER3P56645 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
PER3P56645 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PER3P56645 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.97■□□□□ 0.47
PER3P56645 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PER3P56645 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.97■□□□□ 0.47
PER3P56645 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.97■□□□□ 0.47
PER3P56645 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.97■□□□□ 0.47
PER3P56645 AC004264.1-201ENST00000608354 794 ntBASIC17.97■□□□□ 0.47
PER3P56645 MIR2861-201ENST00000636310 90 ntBASIC17.97■□□□□ 0.47
PER3P56645 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.97■□□□□ 0.47
PER3P56645 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.97■□□□□ 0.47
PER3P56645 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
PER3P56645 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.97■□□□□ 0.47
PER3P56645 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PER3P56645 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PER3P56645 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PER3P56645 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.96■□□□□ 0.47
PER3P56645 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PER3P56645 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PER3P56645 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.96■□□□□ 0.47
PER3P56645 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.96■□□□□ 0.47
PER3P56645 FAM197Y1-201ENST00000421178 764 ntBASIC17.96■□□□□ 0.47
PER3P56645 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PER3P56645 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.96■□□□□ 0.47
PER3P56645 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.96■□□□□ 0.47
PER3P56645 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PER3P56645 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.96■□□□□ 0.47
PER3P56645 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PER3P56645 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PER3P56645 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.96■□□□□ 0.47
PER3P56645 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PER3P56645 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.96■□□□□ 0.47
PER3P56645 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.96■□□□□ 0.47
PER3P56645 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PER3P56645 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
PER3P56645 NBPF21P-201ENST00000425093 1451 ntBASIC17.95■□□□□ 0.46
PER3P56645 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.95■□□□□ 0.46
PER3P56645 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PER3P56645 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PER3P56645 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PER3P56645 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PER3P56645 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.95■□□□□ 0.46
PER3P56645 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms