Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HADHBP55084 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
HADHBP55084 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.39■□□□□ 0.86
HADHBP55084 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HADHBP55084 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
HADHBP55084 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HADHBP55084 AC092368.3-202ENST00000574180 1591 ntBASIC20.39■□□□□ 0.85
HADHBP55084 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HADHBP55084 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HADHBP55084 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HADHBP55084 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HADHBP55084 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.39■□□□□ 0.85
HADHBP55084 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.39■□□□□ 0.85
HADHBP55084 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.39■□□□□ 0.85
HADHBP55084 AC060766.5-201ENST00000590539 871 ntBASIC20.39■□□□□ 0.85
HADHBP55084 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.39■□□□□ 0.85
HADHBP55084 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HADHBP55084 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HADHBP55084 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.38■□□□□ 0.85
HADHBP55084 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.38■□□□□ 0.85
HADHBP55084 AC093525.10-201ENST00000625130 1569 ntBASIC20.38■□□□□ 0.85
HADHBP55084 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.38■□□□□ 0.85
HADHBP55084 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HADHBP55084 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.38■□□□□ 0.85
HADHBP55084 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.38■□□□□ 0.85
HADHBP55084 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HADHBP55084 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HADHBP55084 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HADHBP55084 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.38■□□□□ 0.85
HADHBP55084 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.38■□□□□ 0.85
HADHBP55084 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HADHBP55084 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HADHBP55084 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HADHBP55084 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.38■□□□□ 0.85
HADHBP55084 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.38■□□□□ 0.85
HADHBP55084 AC097658.1-201ENST00000475555 843 ntBASIC20.38■□□□□ 0.85
HADHBP55084 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
HADHBP55084 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.38■□□□□ 0.85
HADHBP55084 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HADHBP55084 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HADHBP55084 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HADHBP55084 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHBP55084 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHBP55084 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHBP55084 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.37■□□□□ 0.85
HADHBP55084 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHBP55084 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HADHBP55084 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HADHBP55084 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHBP55084 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHBP55084 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHBP55084 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.37■□□□□ 0.85
HADHBP55084 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHBP55084 SLC29A4P1-201ENST00000398760 971 ntBASIC20.37■□□□□ 0.85
HADHBP55084 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.37■□□□□ 0.85
HADHBP55084 PNMA6B-201ENST00000538162 1200 ntBASIC20.37■□□□□ 0.85
HADHBP55084 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.37■□□□□ 0.85
HADHBP55084 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.37■□□□□ 0.85
HADHBP55084 AL121829.2-201ENST00000620908 328 ntBASIC20.37■□□□□ 0.85
HADHBP55084 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.37■□□□□ 0.85
HADHBP55084 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HADHBP55084 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHBP55084 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
HADHBP55084 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HADHBP55084 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHBP55084 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HADHBP55084 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.36■□□□□ 0.85
HADHBP55084 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HADHBP55084 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HADHBP55084 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.36■□□□□ 0.85
HADHBP55084 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HADHBP55084 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HADHBP55084 FP475955.4-201ENST00000623131 1990 ntBASIC20.36■□□□□ 0.85
HADHBP55084 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
HADHBP55084 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HADHBP55084 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HADHBP55084 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HADHBP55084 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.36■□□□□ 0.85
HADHBP55084 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.36■□□□□ 0.85
HADHBP55084 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.36■□□□□ 0.85
HADHBP55084 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HADHBP55084 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.36■□□□□ 0.85
HADHBP55084 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.36■□□□□ 0.85
HADHBP55084 AC120498.8-201ENST00000614275 531 ntBASIC20.36■□□□□ 0.85
HADHBP55084 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HADHBP55084 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms