Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.55■■□□□ 1.04
CDK7P50613 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.55■■□□□ 1.04
CDK7P50613 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK7P50613 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK7P50613 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK7P50613 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK7P50613 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK7P50613 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.55■■□□□ 1.04
CDK7P50613 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.55■■□□□ 1.04
CDK7P50613 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.55■■□□□ 1.04
CDK7P50613 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
CDK7P50613 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDK7P50613 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK7P50613 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CDK7P50613 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK7P50613 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CDK7P50613 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK7P50613 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CDK7P50613 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK7P50613 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.55■■□□□ 1.04
CDK7P50613 AC005332.1-201ENST00000577698 1310 ntBASIC21.55■■□□□ 1.04
CDK7P50613 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK7P50613 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK7P50613 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CDK7P50613 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CDK7P50613 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.54■■□□□ 1.04
CDK7P50613 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.54■■□□□ 1.04
CDK7P50613 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK7P50613 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDK7P50613 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.54■■□□□ 1.04
CDK7P50613 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.54■■□□□ 1.04
CDK7P50613 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK7P50613 AC140113.3-201ENST00000605663 199 ntBASIC21.54■■□□□ 1.04
CDK7P50613 AC008622.2-201ENST00000617006 1229 ntBASIC21.54■■□□□ 1.04
CDK7P50613 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CDK7P50613 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK7P50613 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDK7P50613 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK7P50613 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK7P50613 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK7P50613 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK7P50613 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK7P50613 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CDK7P50613 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.53■■□□□ 1.04
CDK7P50613 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.53■■□□□ 1.04
CDK7P50613 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK7P50613 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.53■■□□□ 1.04
CDK7P50613 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK7P50613 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.53■■□□□ 1.04
CDK7P50613 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK7P50613 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.53■■□□□ 1.04
CDK7P50613 KRT8P8-201ENST00000434750 1448 ntBASIC21.53■■□□□ 1.04
CDK7P50613 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.53■■□□□ 1.04
CDK7P50613 AC006128.1-201ENST00000624704 1661 ntBASIC21.53■■□□□ 1.04
CDK7P50613 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK7P50613 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CDK7P50613 AC007225.1-201ENST00000566331 1836 ntBASIC21.52■■□□□ 1.04
CDK7P50613 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.52■■□□□ 1.04
CDK7P50613 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDK7P50613 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK7P50613 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK7P50613 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK7P50613 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDK7P50613 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDK7P50613 AL450487.1-201ENST00000426799 995 ntBASIC21.52■■□□□ 1.04
CDK7P50613 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CDK7P50613 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.52■■□□□ 1.04
CDK7P50613 KRT18P38-201ENST00000449496 1282 ntBASIC21.52■■□□□ 1.04
CDK7P50613 AL359075.1-203ENST00000462729 1002 ntBASIC21.52■■□□□ 1.04
CDK7P50613 AL023973.1-201ENST00000624619 620 ntBASIC21.52■■□□□ 1.04
CDK7P50613 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK7P50613 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CDK7P50613 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK7P50613 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDK7P50613 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK7P50613 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK7P50613 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
CDK7P50613 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK7P50613 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK7P50613 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK7P50613 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.51■■□□□ 1.03
CDK7P50613 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.51■■□□□ 1.03
CDK7P50613 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.51■■□□□ 1.03
CDK7P50613 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.51■■□□□ 1.03
CDK7P50613 AC093458.2-201ENST00000623150 629 ntBASIC21.51■■□□□ 1.03
CDK7P50613 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK7P50613 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.51■■□□□ 1.03
CDK7P50613 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK7P50613 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDK7P50613 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK7P50613 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.5■■□□□ 1.03
CDK7P50613 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK7P50613 AC092720.2-201ENST00000602388 1665 ntBASIC21.5■■□□□ 1.03
CDK7P50613 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDK7P50613 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK7P50613 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.5■■□□□ 1.03
CDK7P50613 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDK7P50613 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK7P50613 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDK7P50613 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms