Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.89■□□□□ 0.45
SLC1A3P43003 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC1A3P43003 AL121906.2-201ENST00000621597 723 ntBASIC17.89■□□□□ 0.45
SLC1A3P43003 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC1A3P43003 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC1A3P43003 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SLC1A3P43003 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC1A3P43003 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC1A3P43003 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC1A3P43003 Z82202.1-201ENST00000623446 1880 ntBASIC17.88■□□□□ 0.45
SLC1A3P43003 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC1A3P43003 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC1A3P43003 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
SLC1A3P43003 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
SLC1A3P43003 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC1A3P43003 UNC93B4-201ENST00000505679 747 ntBASIC17.88■□□□□ 0.45
SLC1A3P43003 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SLC1A3P43003 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SLC1A3P43003 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC1A3P43003 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SLC1A3P43003 AC008687.6-201ENST00000596318 630 ntBASIC17.88■□□□□ 0.45
SLC1A3P43003 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SLC1A3P43003 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC1A3P43003 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC1A3P43003 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC1A3P43003 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SLC1A3P43003 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC1A3P43003 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SLC1A3P43003 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SLC1A3P43003 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC1A3P43003 UNC93B5-201ENST00000530315 699 ntBASIC17.87■□□□□ 0.45
SLC1A3P43003 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC1A3P43003 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC1A3P43003 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SLC1A3P43003 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SLC1A3P43003 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC1A3P43003 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC1A3P43003 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SLC1A3P43003 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC1A3P43003 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC1A3P43003 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC1A3P43003 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
SLC1A3P43003 AIRN-201ENST00000601203 4374 ntBASIC17.86■□□□□ 0.45
SLC1A3P43003 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A3P43003 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A3P43003 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SLC1A3P43003 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC1A3P43003 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A3P43003 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC1A3P43003 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A3P43003 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC1A3P43003 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A3P43003 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.86■□□□□ 0.45
SLC1A3P43003 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC1A3P43003 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SLC1A3P43003 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A3P43003 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SLC1A3P43003 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms