Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH7O60245 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH7O60245 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH7O60245 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDH7O60245 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PCDH7O60245 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDH7O60245 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH7O60245 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH7O60245 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.59■□□□□ 0.57
PCDH7O60245 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH7O60245 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH7O60245 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PCDH7O60245 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH7O60245 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDH7O60245 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH7O60245 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PCDH7O60245 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH7O60245 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH7O60245 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
PCDH7O60245 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDH7O60245 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH7O60245 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PCDH7O60245 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDH7O60245 YBX1P10-201ENST00000444752 975 ntBASIC18.58■□□□□ 0.56
PCDH7O60245 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
PCDH7O60245 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDH7O60245 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDH7O60245 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH7O60245 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH7O60245 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH7O60245 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH7O60245 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH7O60245 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDH7O60245 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH7O60245 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH7O60245 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDH7O60245 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDH7O60245 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDH7O60245 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDH7O60245 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDH7O60245 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDH7O60245 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PCDH7O60245 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PCDH7O60245 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDH7O60245 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.57■□□□□ 0.56
PCDH7O60245 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDH7O60245 AP000974.1-201ENST00000623909 2387 ntBASIC18.57■□□□□ 0.56
PCDH7O60245 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PCDH7O60245 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 BX323043.1-201ENST00000641006 1765 ntBASIC18.57■□□□□ 0.56
PCDH7O60245 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDH7O60245 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDH7O60245 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDH7O60245 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDH7O60245 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH7O60245 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDH7O60245 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH7O60245 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH7O60245 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDH7O60245 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH7O60245 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH7O60245 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH7O60245 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDH7O60245 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDH7O60245 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDH7O60245 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDH7O60245 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PCDH7O60245 AL121829.2-201ENST00000620908 328 ntBASIC18.56■□□□□ 0.56
PCDH7O60245 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH7O60245 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH7O60245 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH7O60245 AC120498.9-201ENST00000339021 3867 ntBASIC18.56■□□□□ 0.56
PCDH7O60245 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PCDH7O60245 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH7O60245 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH7O60245 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDH7O60245 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH7O60245 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDH7O60245 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH7O60245 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH7O60245 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH7O60245 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms