Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 NTF6G-201ENST00000591094 616 ntBASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 AC100791.3-201ENST00000617619 330 ntBASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV5A0A0B4J249 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 AL355472.2-201ENST00000422958 438 ntBASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 ZNRF2P3-201ENST00000424200 374 ntBASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV5A0A0B4J249 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV5A0A0B4J249 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 AC005082.1-201ENST00000413042 2259 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms