Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 AC073111.5-205ENST00000641717 521 ntBASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 BX276092.2-201ENST00000417668 665 ntBASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV30A0A087WSZ9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV30A0A087WSZ9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 LTB4R2-202ENST00000528054 3092 ntBASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV30A0A087WSZ9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAV30A0A087WSZ9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms