Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.59■□□□□ 0.09
LSM4Q9Y4Z0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LSM4Q9Y4Z0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.58■□□□□ 0.09
LSM4Q9Y4Z0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LSM4Q9Y4Z0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
LSM4Q9Y4Z0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LSM4Q9Y4Z0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 AC006058.3-201ENST00000606217 1069 ntBASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 KRT16P6-202ENST00000425692 1426 ntBASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 CYP21A1P-202ENST00000354927 1481 ntBASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.58■□□□□ 0.08
LSM4Q9Y4Z0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 AL138781.2-201ENST00000617896 1843 ntBASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 AC128676.1-201ENST00000454392 318 ntBASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 AC142381.4-202ENST00000563973 229 ntBASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LSM4Q9Y4Z0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms