Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.56■□□□□ 0.88
GDF3Q9NR23 AC006058.3-201ENST00000606217 1069 ntBASIC20.56■□□□□ 0.88
GDF3Q9NR23 AP006294.2-201ENST00000641667 209 ntBASIC20.56■□□□□ 0.88
GDF3Q9NR23 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF3Q9NR23 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF3Q9NR23 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.56■□□□□ 0.88
GDF3Q9NR23 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.56■□□□□ 0.88
GDF3Q9NR23 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.56■□□□□ 0.88
GDF3Q9NR23 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF3Q9NR23 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GDF3Q9NR23 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.56■□□□□ 0.88
GDF3Q9NR23 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF3Q9NR23 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF3Q9NR23 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDF3Q9NR23 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
GDF3Q9NR23 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF3Q9NR23 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF3Q9NR23 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.55■□□□□ 0.88
GDF3Q9NR23 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF3Q9NR23 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF3Q9NR23 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF3Q9NR23 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GDF3Q9NR23 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF3Q9NR23 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF3Q9NR23 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.55■□□□□ 0.88
GDF3Q9NR23 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GDF3Q9NR23 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.55■□□□□ 0.88
GDF3Q9NR23 RPS2P52-201ENST00000469610 820 ntBASIC20.55■□□□□ 0.88
GDF3Q9NR23 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.55■□□□□ 0.88
GDF3Q9NR23 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GDF3Q9NR23 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
GDF3Q9NR23 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF3Q9NR23 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GDF3Q9NR23 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.55■□□□□ 0.88
GDF3Q9NR23 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF3Q9NR23 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
GDF3Q9NR23 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDF3Q9NR23 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
GDF3Q9NR23 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.54■□□□□ 0.88
GDF3Q9NR23 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.54■□□□□ 0.88
GDF3Q9NR23 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.54■□□□□ 0.88
GDF3Q9NR23 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
GDF3Q9NR23 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 AC098590.1-201ENST00000468126 897 ntBASIC20.54■□□□□ 0.88
GDF3Q9NR23 AC100791.3-201ENST00000617619 330 ntBASIC20.54■□□□□ 0.88
GDF3Q9NR23 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.54■□□□□ 0.88
GDF3Q9NR23 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
GDF3Q9NR23 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GDF3Q9NR23 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.54■□□□□ 0.88
GDF3Q9NR23 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDF3Q9NR23 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GDF3Q9NR23 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDF3Q9NR23 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GDF3Q9NR23 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDF3Q9NR23 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
GDF3Q9NR23 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDF3Q9NR23 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.53■□□□□ 0.88
GDF3Q9NR23 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDF3Q9NR23 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.53■□□□□ 0.88
GDF3Q9NR23 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GDF3Q9NR23 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
GDF3Q9NR23 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
GDF3Q9NR23 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDF3Q9NR23 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GDF3Q9NR23 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.52■□□□□ 0.88
GDF3Q9NR23 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
GDF3Q9NR23 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GDF3Q9NR23 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.52■□□□□ 0.88
GDF3Q9NR23 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF3Q9NR23 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
GDF3Q9NR23 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF3Q9NR23 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF3Q9NR23 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF3Q9NR23 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GDF3Q9NR23 AL355472.2-201ENST00000422958 438 ntBASIC20.52■□□□□ 0.88
GDF3Q9NR23 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.52■□□□□ 0.88
GDF3Q9NR23 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.52■□□□□ 0.88
GDF3Q9NR23 GCSHP5-201ENST00000443090 522 ntBASIC20.52■□□□□ 0.88
GDF3Q9NR23 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
GDF3Q9NR23 AC128676.1-201ENST00000454392 318 ntBASIC20.52■□□□□ 0.88
GDF3Q9NR23 AC026366.1-201ENST00000488803 879 ntBASIC20.52■□□□□ 0.88
GDF3Q9NR23 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.52■□□□□ 0.88
GDF3Q9NR23 UNC93B5-201ENST00000530315 699 ntBASIC20.52■□□□□ 0.88
GDF3Q9NR23 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.52■□□□□ 0.88
GDF3Q9NR23 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
GDF3Q9NR23 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF3Q9NR23 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms