Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 AC006015.1-201ENST00000429970 570 ntBASIC18.6■□□□□ 0.57
PIF1Q9H611 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.6■□□□□ 0.57
PIF1Q9H611 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.6■□□□□ 0.57
PIF1Q9H611 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.6■□□□□ 0.57
PIF1Q9H611 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.6■□□□□ 0.57
PIF1Q9H611 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.6■□□□□ 0.57
PIF1Q9H611 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PIF1Q9H611 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.6■□□□□ 0.57
PIF1Q9H611 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PIF1Q9H611 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PIF1Q9H611 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PIF1Q9H611 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PIF1Q9H611 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.59■□□□□ 0.57
PIF1Q9H611 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.59■□□□□ 0.57
PIF1Q9H611 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.59■□□□□ 0.57
PIF1Q9H611 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.59■□□□□ 0.57
PIF1Q9H611 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.59■□□□□ 0.57
PIF1Q9H611 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PIF1Q9H611 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PIF1Q9H611 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.59■□□□□ 0.57
PIF1Q9H611 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PIF1Q9H611 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.59■□□□□ 0.57
PIF1Q9H611 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PIF1Q9H611 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.58■□□□□ 0.57
PIF1Q9H611 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.58■□□□□ 0.57
PIF1Q9H611 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PIF1Q9H611 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PIF1Q9H611 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PIF1Q9H611 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PIF1Q9H611 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PIF1Q9H611 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PIF1Q9H611 AC016769.1-201ENST00000409132 1010 ntBASIC18.58■□□□□ 0.56
PIF1Q9H611 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.58■□□□□ 0.56
PIF1Q9H611 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.58■□□□□ 0.56
PIF1Q9H611 AC022517.1-201ENST00000592429 346 ntBASIC18.58■□□□□ 0.56
PIF1Q9H611 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.58■□□□□ 0.56
PIF1Q9H611 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PIF1Q9H611 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PIF1Q9H611 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PIF1Q9H611 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PIF1Q9H611 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PIF1Q9H611 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.58■□□□□ 0.56
PIF1Q9H611 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.58■□□□□ 0.56
PIF1Q9H611 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.58■□□□□ 0.56
PIF1Q9H611 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PIF1Q9H611 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PIF1Q9H611 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.58■□□□□ 0.56
PIF1Q9H611 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PIF1Q9H611 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PIF1Q9H611 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.58■□□□□ 0.56
PIF1Q9H611 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PIF1Q9H611 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PIF1Q9H611 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PIF1Q9H611 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PIF1Q9H611 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.57■□□□□ 0.56
PIF1Q9H611 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PIF1Q9H611 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PIF1Q9H611 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PIF1Q9H611 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.57■□□□□ 0.56
PIF1Q9H611 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PIF1Q9H611 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PIF1Q9H611 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PIF1Q9H611 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.57■□□□□ 0.56
PIF1Q9H611 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PIF1Q9H611 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PIF1Q9H611 MCRIP2P1-201ENST00000394346 511 ntBASIC18.57■□□□□ 0.56
PIF1Q9H611 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.57■□□□□ 0.56
PIF1Q9H611 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.57■□□□□ 0.56
PIF1Q9H611 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PIF1Q9H611 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PIF1Q9H611 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PIF1Q9H611 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PIF1Q9H611 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PIF1Q9H611 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms