Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 AC007952.6-201ENST00000573168 2673 ntBASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 AC003957.1-201ENST00000625108 2673 ntBASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 RARRES2P10-201ENST00000564312 460 ntBASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 TREX1-205ENST00000625293 1783 ntBASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CCM2Q9BSQ5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 RNF165-205ENST00000588679 2904 ntBASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.18■□□□□ 0.66
CCM2Q9BSQ5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 AL353807.1-201ENST00000427475 662 ntBASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 C1QL1P1-201ENST00000568105 661 ntBASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
CCM2Q9BSQ5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms