Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP1S3Q96PC3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.71□□□□□ -0.06
AP1S3Q96PC3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
AP1S3Q96PC3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
AP1S3Q96PC3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
AP1S3Q96PC3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.71□□□□□ -0.06
AP1S3Q96PC3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP1S3Q96PC3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP1S3Q96PC3 MIR600HG-201ENST00000449175 5984 ntBASIC14.7□□□□□ -0.06
AP1S3Q96PC3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 RARRES2P11-201ENST00000635158 484 ntBASIC14.7□□□□□ -0.06
AP1S3Q96PC3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.7□□□□□ -0.06
AP1S3Q96PC3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 AC116562.4-201ENST00000641316 2276 ntBASIC14.69□□□□□ -0.06
AP1S3Q96PC3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 AC079140.4-201ENST00000507448 529 ntBASIC14.69□□□□□ -0.06
AP1S3Q96PC3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.69□□□□□ -0.06
AP1S3Q96PC3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S3Q96PC3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms