Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF439Q8NDP4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.14■□□□□ 0.18
ZNF439Q8NDP4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.14■□□□□ 0.18
ZNF439Q8NDP4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 AC006557.6-201ENST00000623071 864 ntBASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 AC133041.1-202ENST00000642053 222 ntBASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF439Q8NDP4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 AC092368.3-202ENST00000574180 1591 ntBASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 AC060766.5-201ENST00000590539 871 ntBASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF439Q8NDP4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 PNMA6B-201ENST00000538162 1200 ntBASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 TFP1-202ENST00000475455 1573 ntBASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF439Q8NDP4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF439Q8NDP4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms