Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 AP000692.2-201ENST00000608391 879 ntBASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 RCC2P6-201ENST00000526625 1557 ntBASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 AP005212.1-201ENST00000581547 1997 ntBASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COLGALT1Q8NBJ5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 HLA-A-209ENST00000638375 975 ntBASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 GABARAPL3-202ENST00000624044 1851 ntBASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COLGALT1Q8NBJ5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 AC011298.2-201ENST00000617989 482 ntBASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COLGALT1Q8NBJ5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COLGALT1Q8NBJ5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COLGALT1Q8NBJ5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COLGALT1Q8NBJ5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 AC008040.2-201ENST00000461049 708 ntBASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COLGALT1Q8NBJ5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COLGALT1Q8NBJ5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COLGALT1Q8NBJ5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COLGALT1Q8NBJ5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21■□□□□ 0.95
COLGALT1Q8NBJ5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21■□□□□ 0.95
COLGALT1Q8NBJ5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COLGALT1Q8NBJ5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21■□□□□ 0.95
COLGALT1Q8NBJ5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COLGALT1Q8NBJ5 AC004951.3-201ENST00000418645 1148 ntBASIC21■□□□□ 0.95
COLGALT1Q8NBJ5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21■□□□□ 0.95
COLGALT1Q8NBJ5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21■□□□□ 0.95
COLGALT1Q8NBJ5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21■□□□□ 0.95
COLGALT1Q8NBJ5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21■□□□□ 0.95
COLGALT1Q8NBJ5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms