Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 AC080038.1-201ENST00000611274 1154 ntBASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.76■□□□□ 0.75
SRRM1Q8IYB3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 KRT8P20-201ENST00000423953 1409 ntBASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRRM1Q8IYB3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 HCG11-201ENST00000411553 5696 ntBASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 AL355802.2-201ENST00000402069 882 ntBASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 AC123595.1-201ENST00000440769 1046 ntBASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 AL161938.1-201ENST00000569833 2180 ntBASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SRRM1Q8IYB3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRRM1Q8IYB3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms