Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 RAP2CP1-201ENST00000605103 478 ntBASIC19.87■□□□□ 0.77
CASC4Q6P4E1 Z82202.1-201ENST00000623446 1880 ntBASIC19.87■□□□□ 0.77
CASC4Q6P4E1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 AL032819.2-201ENST00000624543 2162 ntBASIC19.87■□□□□ 0.77
CASC4Q6P4E1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASC4Q6P4E1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 MIPEPP3-201ENST00000412105 444 ntBASIC19.86■□□□□ 0.77
CASC4Q6P4E1 AC083906.2-201ENST00000511578 360 ntBASIC19.86■□□□□ 0.77
CASC4Q6P4E1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 AL121832.2-201ENST00000610979 668 ntBASIC19.86■□□□□ 0.77
CASC4Q6P4E1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CASC4Q6P4E1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 DUSP5P2-201ENST00000426873 1033 ntBASIC19.85■□□□□ 0.77
CASC4Q6P4E1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASC4Q6P4E1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 AC116351.2-201ENST00000606540 1585 ntBASIC19.84■□□□□ 0.77
CASC4Q6P4E1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 BX323043.1-201ENST00000641006 1765 ntBASIC19.84■□□□□ 0.77
CASC4Q6P4E1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.84■□□□□ 0.77
CASC4Q6P4E1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASC4Q6P4E1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASC4Q6P4E1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms