Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
FAM53AQ6NSI3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 AC069152.1-201ENST00000438030 544 ntBASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 AC142086.2-201ENST00000569753 217 ntBASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FAM53AQ6NSI3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
FAM53AQ6NSI3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FAM53AQ6NSI3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 ID1-201ENST00000376105 1233 ntBASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 AC073210.2-201ENST00000430369 194 ntBASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 SOX15-203ENST00000570788 1093 ntBASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 HLA-B-256ENST00000639848 1089 ntBASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 AC018445.3-201ENST00000624177 1945 ntBASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FAM53AQ6NSI3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FAM53AQ6NSI3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FAM53AQ6NSI3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms