Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL15A1P39059 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
COL15A1P39059 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
COL15A1P39059 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL15A1P39059 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL15A1P39059 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
COL15A1P39059 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL15A1P39059 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC24.8■■□□□ 1.56
COL15A1P39059 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
COL15A1P39059 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC24.8■■□□□ 1.56
COL15A1P39059 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC24.8■■□□□ 1.56
COL15A1P39059 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL15A1P39059 COX11P1-201ENST00000489116 835 ntBASIC24.8■■□□□ 1.56
COL15A1P39059 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC24.8■■□□□ 1.56
COL15A1P39059 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC24.8■■□□□ 1.56
COL15A1P39059 CLN6-204ENST00000564752 900 ntTSL 3 BASIC24.8■■□□□ 1.56
COL15A1P39059 AL023803.3-201ENST00000615559 522 ntBASIC24.8■■□□□ 1.56
COL15A1P39059 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL15A1P39059 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL15A1P39059 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL15A1P39059 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL15A1P39059 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL15A1P39059 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
COL15A1P39059 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL15A1P39059 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.79■■□□□ 1.56
COL15A1P39059 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL15A1P39059 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
COL15A1P39059 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL15A1P39059 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC24.79■■□□□ 1.56
COL15A1P39059 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC24.79■■□□□ 1.56
COL15A1P39059 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL15A1P39059 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
COL15A1P39059 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC24.79■■□□□ 1.56
COL15A1P39059 AC141257.4-201ENST00000634557 245 ntBASIC24.79■■□□□ 1.56
COL15A1P39059 AC136944.6-201ENST00000634818 245 ntBASIC24.79■■□□□ 1.56
COL15A1P39059 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL15A1P39059 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL15A1P39059 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.78■■□□□ 1.56
COL15A1P39059 KRT8P8-201ENST00000434750 1448 ntBASIC24.78■■□□□ 1.56
COL15A1P39059 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL15A1P39059 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
COL15A1P39059 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
COL15A1P39059 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC24.78■■□□□ 1.56
COL15A1P39059 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC24.78■■□□□ 1.56
COL15A1P39059 TSPY5P-201ENST00000426936 936 ntBASIC24.78■■□□□ 1.56
COL15A1P39059 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC24.78■■□□□ 1.56
COL15A1P39059 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC24.78■■□□□ 1.56
COL15A1P39059 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC24.78■■□□□ 1.56
COL15A1P39059 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
COL15A1P39059 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL15A1P39059 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
COL15A1P39059 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL15A1P39059 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC24.77■■□□□ 1.56
COL15A1P39059 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL15A1P39059 AL512408.1-201ENST00000569378 2000 ntBASIC24.77■■□□□ 1.56
COL15A1P39059 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL15A1P39059 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC24.77■■□□□ 1.56
COL15A1P39059 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.77■■□□□ 1.56
COL15A1P39059 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL15A1P39059 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL15A1P39059 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL15A1P39059 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
COL15A1P39059 DERL1-203ENST00000419562 918 ntTSL 2 BASIC24.77■■□□□ 1.56
COL15A1P39059 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL15A1P39059 AC092647.4-201ENST00000457211 535 ntBASIC24.77■■□□□ 1.56
COL15A1P39059 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL15A1P39059 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL15A1P39059 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL15A1P39059 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.76■■□□□ 1.55
COL15A1P39059 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL15A1P39059 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL15A1P39059 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC24.76■■□□□ 1.55
COL15A1P39059 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL15A1P39059 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL15A1P39059 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL15A1P39059 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.76■■□□□ 1.55
COL15A1P39059 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL15A1P39059 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC24.76■■□□□ 1.55
COL15A1P39059 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.76■■□□□ 1.55
COL15A1P39059 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.76■■□□□ 1.55
COL15A1P39059 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC24.76■■□□□ 1.55
COL15A1P39059 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL15A1P39059 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC24.76■■□□□ 1.55
COL15A1P39059 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC24.76■■□□□ 1.55
COL15A1P39059 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL15A1P39059 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.76■■□□□ 1.55
COL15A1P39059 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
COL15A1P39059 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL15A1P39059 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL15A1P39059 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL15A1P39059 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
COL15A1P39059 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL15A1P39059 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL15A1P39059 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
COL15A1P39059 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL15A1P39059 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC24.75■■□□□ 1.55
COL15A1P39059 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC24.75■■□□□ 1.55
COL15A1P39059 AP000550.4-202ENST00000639755 178 ntBASIC24.75■■□□□ 1.55
COL15A1P39059 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
COL15A1P39059 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms