Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB3BP20337 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 AC005332.8-201ENST00000622750 2735 ntBASIC17.09■□□□□ 0.33
RAB3BP20337 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.09■□□□□ 0.33
RAB3BP20337 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.09■□□□□ 0.33
RAB3BP20337 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3BP20337 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
RAB3BP20337 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB3BP20337 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3BP20337 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3BP20337 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3BP20337 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB3BP20337 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAB3BP20337 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.08■□□□□ 0.33
RAB3BP20337 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
RAB3BP20337 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.08■□□□□ 0.33
RAB3BP20337 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB3BP20337 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB3BP20337 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3BP20337 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3BP20337 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RAB3BP20337 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3BP20337 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3BP20337 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3BP20337 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB3BP20337 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.08■□□□□ 0.32
RAB3BP20337 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.08■□□□□ 0.32
RAB3BP20337 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.08■□□□□ 0.32
RAB3BP20337 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
RAB3BP20337 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3BP20337 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3BP20337 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3BP20337 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3BP20337 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3BP20337 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3BP20337 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3BP20337 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3BP20337 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3BP20337 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB3BP20337 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB3BP20337 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3BP20337 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3BP20337 PHGDH-210ENST00000641115 1638 ntBASIC17.07■□□□□ 0.32
RAB3BP20337 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RAB3BP20337 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB3BP20337 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3BP20337 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB3BP20337 AC135050.7-201ENST00000624508 2218 ntBASIC17.07■□□□□ 0.32
RAB3BP20337 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3BP20337 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.07■□□□□ 0.32
RAB3BP20337 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3BP20337 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.07■□□□□ 0.32
RAB3BP20337 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.07■□□□□ 0.32
RAB3BP20337 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3BP20337 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB3BP20337 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAB3BP20337 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAB3BP20337 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3BP20337 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB3BP20337 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAB3BP20337 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3BP20337 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3BP20337 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RAB3BP20337 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB3BP20337 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB3BP20337 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RAB3BP20337 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAB3BP20337 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAB3BP20337 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3BP20337 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3BP20337 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB3BP20337 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RAB3BP20337 LINC02228-203ENST00000641970 1355 ntBASIC17.06■□□□□ 0.32
RAB3BP20337 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB3BP20337 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3BP20337 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3BP20337 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB3BP20337 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RAB3BP20337 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.06■□□□□ 0.32
RAB3BP20337 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.06■□□□□ 0.32
RAB3BP20337 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB3BP20337 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB3BP20337 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB3BP20337 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.06■□□□□ 0.32
RAB3BP20337 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.06■□□□□ 0.32
RAB3BP20337 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB3BP20337 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3BP20337 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms