Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H2AFXP16104 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2AFXP16104 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.29■□□□□ 0.84
H2AFXP16104 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H2AFXP16104 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2AFXP16104 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2AFXP16104 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H2AFXP16104 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.29■□□□□ 0.84
H2AFXP16104 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H2AFXP16104 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H2AFXP16104 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.29■□□□□ 0.84
H2AFXP16104 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.29■□□□□ 0.84
H2AFXP16104 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2AFXP16104 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2AFXP16104 AC141586.5-201ENST00000624546 2050 ntBASIC20.29■□□□□ 0.84
H2AFXP16104 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
H2AFXP16104 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.29■□□□□ 0.84
H2AFXP16104 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
H2AFXP16104 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
H2AFXP16104 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2AFXP16104 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.29■□□□□ 0.84
H2AFXP16104 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2AFXP16104 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2AFXP16104 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H2AFXP16104 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.28■□□□□ 0.84
H2AFXP16104 AC073592.3-201ENST00000625118 1834 ntBASIC20.28■□□□□ 0.84
H2AFXP16104 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
H2AFXP16104 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.28■□□□□ 0.84
H2AFXP16104 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
H2AFXP16104 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.28■□□□□ 0.84
H2AFXP16104 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
H2AFXP16104 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.28■□□□□ 0.84
H2AFXP16104 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
H2AFXP16104 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2AFXP16104 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.28■□□□□ 0.84
H2AFXP16104 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2AFXP16104 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2AFXP16104 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.27■□□□□ 0.84
H2AFXP16104 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.27■□□□□ 0.84
H2AFXP16104 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2AFXP16104 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
H2AFXP16104 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2AFXP16104 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
H2AFXP16104 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2AFXP16104 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.27■□□□□ 0.84
H2AFXP16104 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
H2AFXP16104 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2AFXP16104 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.27■□□□□ 0.84
H2AFXP16104 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.27■□□□□ 0.84
H2AFXP16104 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2AFXP16104 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2AFXP16104 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2AFXP16104 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
H2AFXP16104 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
H2AFXP16104 KRT8P17-201ENST00000453110 1448 ntBASIC20.27■□□□□ 0.83
H2AFXP16104 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2AFXP16104 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2AFXP16104 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.26■□□□□ 0.83
H2AFXP16104 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.26■□□□□ 0.83
H2AFXP16104 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2AFXP16104 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2AFXP16104 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.26■□□□□ 0.83
H2AFXP16104 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2AFXP16104 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2AFXP16104 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2AFXP16104 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2AFXP16104 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2AFXP16104 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.26■□□□□ 0.83
H2AFXP16104 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.26■□□□□ 0.83
H2AFXP16104 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H2AFXP16104 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.26■□□□□ 0.83
H2AFXP16104 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2AFXP16104 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2AFXP16104 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
H2AFXP16104 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H2AFXP16104 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.26■□□□□ 0.83
H2AFXP16104 KRT16P6-202ENST00000425692 1426 ntBASIC20.26■□□□□ 0.83
H2AFXP16104 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.25■□□□□ 0.83
H2AFXP16104 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.25■□□□□ 0.83
H2AFXP16104 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
H2AFXP16104 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H2AFXP16104 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.25■□□□□ 0.83
H2AFXP16104 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2AFXP16104 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2AFXP16104 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H2AFXP16104 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms