Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HMGN1P05114 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HMGN1P05114 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.65■□□□□ 0.42
HMGN1P05114 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGN1P05114 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.65■□□□□ 0.42
HMGN1P05114 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
HMGN1P05114 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
HMGN1P05114 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGN1P05114 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HMGN1P05114 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN1P05114 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
HMGN1P05114 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.64■□□□□ 0.42
HMGN1P05114 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
HMGN1P05114 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HMGN1P05114 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HMGN1P05114 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HMGN1P05114 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HMGN1P05114 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGN1P05114 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
HMGN1P05114 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
HMGN1P05114 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.64■□□□□ 0.41
HMGN1P05114 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HMGN1P05114 AL355472.2-201ENST00000422958 438 ntBASIC17.64■□□□□ 0.41
HMGN1P05114 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.64■□□□□ 0.41
HMGN1P05114 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGN1P05114 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.64■□□□□ 0.41
HMGN1P05114 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HMGN1P05114 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGN1P05114 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN1P05114 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGN1P05114 AC018553.1-201ENST00000616682 1458 ntBASIC17.63■□□□□ 0.41
HMGN1P05114 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HMGN1P05114 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGN1P05114 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 AC016769.1-201ENST00000409132 1010 ntBASIC17.63■□□□□ 0.41
HMGN1P05114 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGN1P05114 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGN1P05114 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGN1P05114 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGN1P05114 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN1P05114 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HMGN1P05114 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGN1P05114 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGN1P05114 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGN1P05114 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGN1P05114 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGN1P05114 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGN1P05114 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGN1P05114 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.62■□□□□ 0.41
HMGN1P05114 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGN1P05114 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.62■□□□□ 0.41
HMGN1P05114 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGN1P05114 CYP2T1P-201ENST00000432607 1285 ntBASIC17.62■□□□□ 0.41
HMGN1P05114 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGN1P05114 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGN1P05114 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms