Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.4■□□□□ 0.7
CAPNS1P04632 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CAPNS1P04632 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CAPNS1P04632 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
CAPNS1P04632 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.4■□□□□ 0.7
CAPNS1P04632 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.4■□□□□ 0.7
CAPNS1P04632 TPM4P1-201ENST00000436100 807 ntBASIC19.4■□□□□ 0.7
CAPNS1P04632 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.4■□□□□ 0.7
CAPNS1P04632 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.4■□□□□ 0.7
CAPNS1P04632 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.4■□□□□ 0.7
CAPNS1P04632 AC006557.6-201ENST00000623071 864 ntBASIC19.4■□□□□ 0.7
CAPNS1P04632 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CAPNS1P04632 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPNS1P04632 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CAPNS1P04632 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPNS1P04632 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.4■□□□□ 0.7
CAPNS1P04632 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CAPNS1P04632 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CAPNS1P04632 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPNS1P04632 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.4■□□□□ 0.7
CAPNS1P04632 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CAPNS1P04632 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPNS1P04632 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPNS1P04632 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.4■□□□□ 0.7
CAPNS1P04632 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CAPNS1P04632 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.4■□□□□ 0.7
CAPNS1P04632 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.4■□□□□ 0.7
CAPNS1P04632 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CAPNS1P04632 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.39■□□□□ 0.69
CAPNS1P04632 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
CAPNS1P04632 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CAPNS1P04632 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CAPNS1P04632 AL121894.2-201ENST00000602977 491 ntBASIC19.39■□□□□ 0.69
CAPNS1P04632 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.39■□□□□ 0.69
CAPNS1P04632 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 LINC01568-207ENST00000641790 1380 ntBASIC19.39■□□□□ 0.69
CAPNS1P04632 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.39■□□□□ 0.69
CAPNS1P04632 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.39■□□□□ 0.69
CAPNS1P04632 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CAPNS1P04632 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPNS1P04632 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPNS1P04632 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.38■□□□□ 0.69
CAPNS1P04632 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPNS1P04632 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CAPNS1P04632 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CAPNS1P04632 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CAPNS1P04632 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CAPNS1P04632 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CAPNS1P04632 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPNS1P04632 AC007322.3-201ENST00000426526 701 ntBASIC19.38■□□□□ 0.69
CAPNS1P04632 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.38■□□□□ 0.69
CAPNS1P04632 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CAPNS1P04632 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CAPNS1P04632 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CAPNS1P04632 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.38■□□□□ 0.69
CAPNS1P04632 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.38■□□□□ 0.69
CAPNS1P04632 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.38■□□□□ 0.69
CAPNS1P04632 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CAPNS1P04632 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CAPNS1P04632 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPNS1P04632 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.38■□□□□ 0.69
CAPNS1P04632 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CAPNS1P04632 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPNS1P04632 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.37■□□□□ 0.69
CAPNS1P04632 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPNS1P04632 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.37■□□□□ 0.69
CAPNS1P04632 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CAPNS1P04632 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.37■□□□□ 0.69
CAPNS1P04632 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPNS1P04632 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPNS1P04632 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CAPNS1P04632 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPNS1P04632 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CAPNS1P04632 AL137013.1-201ENST00000432946 1228 ntBASIC19.37■□□□□ 0.69
CAPNS1P04632 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.37■□□□□ 0.69
CAPNS1P04632 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPNS1P04632 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CAPNS1P04632 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.37■□□□□ 0.69
CAPNS1P04632 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.37■□□□□ 0.69
CAPNS1P04632 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.37■□□□□ 0.69
CAPNS1P04632 AC087388.1-201ENST00000571370 1112 ntBASIC19.37■□□□□ 0.69
CAPNS1P04632 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CAPNS1P04632 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CAPNS1P04632 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPNS1P04632 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPNS1P04632 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms